Dr Kangabu · Melbourne, Australia

I read

A computational biologist turning genomic data into breeding decisions for the past decade. At Agriculture Victoria I build the sequencing pipelines behind DairyBio, a $50M national dairy program, from SNP arrays to long-read Nanopore and PacBio genomes. That work produced the largest structural-variant catalogue for dairy and beef cattle, 30+ peer-reviewed papers, and invited talks at PAG, AAABG and AGTA.

See my research
GenomicsLong-read sequencingNanoporeStructural variantsMulti-omicsRNA-seqBioinformaticsSingle-cellPacBioGenomicsLong-read sequencingNanoporeStructural variantsMulti-omicsRNA-seqBioinformaticsSingle-cellPacBio
Dairy cattleGWASGenomic predictionImputationDairyBioNextflowHPCAWSR & PythonDairy cattleGWASGenomic predictionImputationDairyBioNextflowHPCAWSR & Python
Machine learningLLMs & GenAIExplainable AIAquaculturePrawns & catfishData evangelistStorytellerCoffee-poweredPhotographyGamingMachine learningLLMs & GenAIExplainable AIAquaculturePrawns & catfishData evangelistStorytellerCoffee-poweredPhotographyGaming

10+

Years reading genomes

30+

Peer-reviewed publications

700

Citations · h-index 16

0.5 mil+

LARGEST DATASET HANDLED

What I work on

All research areas →
01

Long-read genomics

Applying Nanopore and PacBio ultra-long reads to make sense of variants, reaching the parts short reads can't.

02

Transcriptomics

Bulk and single-cell RNA-seq to see which genes are switched on, in which cells, and when.

03

Big-data mining in genomics

Finding signal in large genomic datasets: variants, traits, and the links between them.

04

Bioinformatics tools & workflows

Building scalable, reproducible pipelines in Nextflow, plus the small scripts that quietly hold a project together.

Selected work

See all work →
Agriculture Victoria · Now

Dairy cattle genomics

SNP arrays through to long-read sequencing, hunting genetic variants and mapping complex traits for the Australian dairy industry.

Long-readGWASNextflow
PhD · 2016–2019

Aquaculture genomics

Molecular genetics of lobsters and fish at the University of the Sunshine Coast, my first deep dive into genomes.

CrustaceansMolecular
Vietnam · Earlier

Biotechnology

Early molecular-genetics work at International University, HCMC, where the whole story started.

BiotechGenetics

Let's talk science.

Always up for a chat about genomics, sequencing, tech, or anything in between. Based in Melbourne, reachable from anywhere.